ip4-team
Bioinformatics at the Pelé Pequeno Príncipe Research Institute
CNVfinder
CNVfinder is a Python 3.x package for copy number variation (CNV) detection on whole exome sequencing (WES) data from amplicon-based enrichment technologies.
ionwatcherbot
A Telegram bot which, when connected to a Torrent Server via network, is able to fetch information about runs in progress and send it to trusted users, without exposing the Torrent Server itself outside the network.
Gamomics
A mobile app for learning how to apply next-generation sequencing techniques to solve real life challenges!
bedhandler
A Python 3.x package for loading BED and TSV files related to Ion Torrent TM sequencers from ThermoFisher Scientific. For example, the BED for amplicons, effective regions and the TSV file containing coverage data for a specific run.
targetsqc
A quality control tool that alerts about regions of low coverage and missing regions in amplicon-based exome sequencing. It can also filter an annotated VCF file (ANNOVAR format) based on the provided gene list.